Genealogical Estimation of Variant Age (GEVA)
Inference of the ancestral origin of a genetic variant at a single locus
rs536219729
Alleles:
reference
Tancestral
alternate
Aderived
Age estimated for the alternate allele, assuming that it was derived from the reference allele as the ancestral state.
How was the ancestral/derived state determined?Chromosome
2
position 136,557,293
(GRCh37)
Explore rs536219729
on Ensembl!
Allele frequency in SGDP ⇪
Sample | 98.6% |
1.4% |
|
AFR |
90.9% |
9.1% |
|
AMR |
100.0% |
0.0% |
|
CAS |
100.0% |
0.0% |
|
EAS |
100.0% |
0.0% |
|
OCN |
100.0% |
0.0% |
|
SAS |
100.0% |
0.0% |
|
WEA |
100.0% |
0.0% |
|
reference | ← allele frequency → | alternate |
Select clock model
Age estimation summary
Data source | Estimated age of A allele |
# pairs = concordant + discordant | Quality score |
---|---|---|---|
Genomes in SGDP | 8,243.1 generations | 118 = 23 + 95 | 0.947 |
Pairwise results table
Haplotype pair | Pair type | Data source | Breakpoint positions | Physical length (bp) | Genetic Length (cM) | α | β | Mean TMRCA (generations) |
---|---|---|---|---|---|---|---|---|
S_Ju_hoan_North-1A + S_Ju_hoan_North-3A | Concordant | SGDP | 136,399,121 – 136,644,413 |
245,292.0 |
0.04213799 |
18 | 152.4506 | 2,361.4 |
S_Ju_hoan_North-2B + S_Khomani_San-2A | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
14 | 49.3533 | 5,673.4 |
S_Ju_hoan_North-2B + S_Khomani_San-1A | Concordant | SGDP | 136,411,978 – 136,801,475 |
389,497.5 |
0.12086568 |
35 | 284.6513 | 2,459.1 |
S_Khomani_San-1A + B_Ju_hoan_North-4A | Concordant | SGDP | 136,080,221 – 136,786,842 |
706,621.0 |
0.09231650 |
134 | 414.0313 | 6,472.9 |
S_Ju_hoan_North-2B + B_Ju_hoan_North-4A | Concordant | SGDP | 136,341,972 – 137,058,509 |
716,537.0 |
0.56883420 |
41 | 800.0051 | 1,025.0 |
S_Ju_hoan_North-1A + S_Khomani_San-1A | Concordant | SGDP | 135,729,071 – 136,801,475 |
1,072,404.5 |
0.29129866 |
173 | 748.7931 | 4,620.8 |
S_Khomani_San-2A + S_Khomani_San-1A | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
14 | 49.3533 | 5,673.4 |
S_Ju_hoan_North-3A + S_Khomani_San-2A | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
14 | 49.3533 | 5,673.4 |
S_Ju_hoan_North-3A + S_Khomani_San-2B | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
12 | 49.3533 | 4,862.9 |
S_Mbuti-1A + S_Khomani_San-1A | Concordant | SGDP | 136,489,176 – 136,588,252 |
99,076.0 |
0.01619202 |
14 | 61.5101 | 4,552.1 |
S_Ju_hoan_North-3A + B_Ju_hoan_North-4A | Concordant | SGDP | 135,439,018 – 136,644,413 |
1,205,395.0 |
0.34527206 |
103 | 855.8072 | 2,407.1 |
S_Mbuti-1A + S_Khomani_San-2B | Concordant | SGDP | 136,491,330 – 136,559,711 |
68,381.0 |
0.01247340 |
9 | 43.8016 | 4,109.4 |
S_Mbuti-1A + B_Ju_hoan_North-4A | Concordant | SGDP | 136,489,176 – 136,588,252 |
99,076.0 |
0.01619202 |
9 | 61.5101 | 2,926.3 |
S_Mbuti-1A + S_Ju_hoan_North-1A | Concordant | SGDP | 136,489,176 – 136,588,252 |
99,076.0 |
0.01619202 |
13 | 61.5101 | 4,226.9 |
S_Ju_hoan_North-1A + B_Ju_hoan_North-4A | Concordant | SGDP | 136,401,078 – 137,093,720 |
692,641.5 |
0.63258900 |
49 | 839.5391 | 1,167.3 |
S_Ju_hoan_North-3A + S_Khomani_San-1A | Concordant | SGDP | 136,080,221 – 136,644,413 |
564,192.5 |
0.06056790 |
113 | 320.2667 | 7,056.6 |
S_Ju_hoan_North-1A + S_Khomani_San-2B | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
13 | 49.3533 | 5,268.1 |
S_Ju_hoan_North-2B + S_Ju_hoan_North-3A | Concordant | SGDP | 136,406,898 – 136,644,413 |
237,515.0 |
0.04190494 |
11 | 148.5312 | 1,481.2 |
S_Khomani_San-2A + B_Ju_hoan_North-4A | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
13 | 49.3533 | 5,268.1 |
S_Ju_hoan_North-2B + S_Ju_hoan_North-1A | Concordant | SGDP | 136,406,898 – 137,034,384 |
627,485.5 |
0.40473764 |
32 | 625.9831 | 1,022.4 |
S_Khomani_San-2B + B_Ju_hoan_North-4A | Concordant | SGDP | 136,482,918 – 136,559,711 |
76,792.5 |
0.01436618 |
11 | 49.3533 | 4,457.7 |
S_Mbuti-1A + S_Ju_hoan_North-2B | Concordant | SGDP | 136,489,176 – 136,588,252 |
99,076.0 |
0.01619202 |
10 | 61.5101 | 3,251.5 |
S_Mbuti-1A + S_Ju_hoan_North-3A | Concordant | SGDP | 136,489,176 – 136,588,252 |
99,076.0 |
0.01619202 |
9 | 61.5101 | 2,926.3 |
S_Mbuti-1A + S_Saharawi-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Ju_hoan_North-1A + S_Kyrgyz-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Spanish-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Yemenite_Jew-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Polish-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_North_Ossetian-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Estonian-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Hungarian-2B | Discordant | SGDP | 136,557,257 – 136,714,614 |
157,356.5 |
0.02086236 |
18 | 93.2210 | 3,861.8 |
S_Mbuti-1A + S_Tlingit-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Aleut-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Tubalar-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mongola-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mixtec-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2A + B_Sardinian-3A | Discordant | SGDP | 136,557,257 – 136,735,800 |
178,542.5 |
0.02107832 |
23 | 103.5631 | 4,441.7 |
S_Mbuti-1A + S_Finnish-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Itelman-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Saami-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mixtec-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_French-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Lezgin-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Basque-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Adygei-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Greek-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Turkish-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Iranian-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + B_French-3A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Druze-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Ju_hoan_North-2B + S_Czech-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Bergamo-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2A + S_Eskimo_Sireniki-1B | Discordant | SGDP | 136,557,257 – 136,762,052 |
204,794.5 |
0.02229313 |
28 | 117.1359 | 4,780.8 |
S_Mbuti-1A + S_Jordanian-3A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Eskimo_Chaplin-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Norwegian-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Punjabi-3B | Discordant | SGDP | 136,557,257 – 136,735,800 |
178,542.5 |
0.02107832 |
17 | 103.5631 | 3,283.0 |
S_Mbuti-1A + S_Orcadian-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Dai-3A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mozabite-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Estonian-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Uygur-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Finnish-3B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Xibo-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Saami-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Yi-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_French-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Dai-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Georgian-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Xibo-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Icelandic-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Dai-1A | Discordant | SGDP | 135,793,417 – 136,557,306 |
763,889.0 |
0.05564127 |
189 | 412.1797 | 9,170.8 |
S_Mbuti-1A + S_Samaritan-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Kinh-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Bergamo-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Maori-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Tuscan-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Maori-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Norwegian-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Chukchi-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Orcadian-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mozabite-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Orcadian-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Mansi-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Lezgin-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Brahmin-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Lezgin-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Balochi-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Adygei-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Brahui-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Spanish-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Makrani-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Tajik-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Pathan-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Yemenite_Jew-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Burusho-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + B_Crete-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Hazara-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + B_Mixe-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Sindhi-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Karitiana-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Punjabi-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Ju_hoan_North-1A + S_Mongola-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Punjabi-4A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2A + S_Mixe-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Bulgarian-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2A + S_Tajik-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Atayal-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2A + B_Karitiana-3B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_English-1A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Oroqen-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_English-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Eskimo_Naukan-2A | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_English-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Khomani_San-2B + S_Bulgarian-2A | Discordant | SGDP | 136,557,257 – 136,711,848 |
154,590.5 |
0.02083345 |
17 | 91.8702 | 3,700.9 |
S_Mbuti-1A + S_BantuKenya-1A | Discordant | SGDP | 136,556,012 – 136,565,535 |
9,523.0 |
0.00304087 |
4 | 8.0037 | 9,995.3 |
S_Khomani_San-2B + S_Chane-1B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
S_Mbuti-1A + S_Estonian-2B | Discordant | SGDP | 136,557,257 – 136,557,306 |
49.0 |
0.00006749 |
4 | 1.0775 | 74,244.8 |
Data shown in this table can be downloaded from this page.
α | Shape parameter of the Gamma distribution, calculated from the number of pairwise differences along the sequence of the inferred shared haplotype segment (mutation clock), or the breakpoints detected (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
β | Rate parameter of the Gamma distribution, calculated from the physical length of the inferred shared haplotype segment and the mutation rate (mutation clock), or the genetic length given the variable recombination rate (recombination clock), or both (joint clock); plus the parameter of the coalescent prior distribution (equal to 1 by default). |
Mean TMRCA | Calculated as the mean of the Gamma distribution with parameters α and β, multiplied by 2 x Ne, where Ne = 10,000 by default. |
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